.. _gray-matter-segmentation:

Gray matter segmentation
########################

The tutorials below provide a guide to segmenting the gray and white matter for your data, then using these segmentations for various applications (metric computation, as well as improving registration results).

.. toctree::
   :maxdepth: 1

   gray-matter-segmentation/gm-wm-segmentation
   gray-matter-segmentation/gm-wm-metric-computation
   gray-matter-segmentation/improving-registration-with-gm-seg

.. note::

   The tutorials in this section focus only on the full gray and white matter segmentations. For more granular analysis (i.e. extracting metrics for individual gray and white matter tracts), visit the :ref:`atlas-based-analysis` tutorial.