Before starting this tutorial#

  1. Make sure that you have the following file in your working directory:

    • t2s/t2s.nii.gz : A T2* anatomical image of the spinal region.

    You can get this file by downloading data_gm-wm-segmentation.zip.

  2. Open a terminal and navigate to the single_subject/data/t2s/ directory:

cd {PATH_TO_DOWNLOADED_DATA}/single_subject/data/t2s/