Installation

SCT works in MacOS, Linux and Windows (see Requirements below). SCT bundles its own Python distribution (Miniconda), installed with all the required packages, and uses specific package versions, in order to ensure reproducibility of results. SCT offers various installation methods. First, select your operating system:

FSLeyes Integration

In addition to our Spinal Cord Toolbox package, we also offer a plugin which works with the FSLeyes package.