Gray matter segmentation

The tutorials below provide a guide to segmenting the gray and white matter for your data, then using these segmentations for various applications (metric computation, as well as improving registration results).

• Segmenting the gray and white matter for T2* data
• Computing metrics using GM and WM segmentations
• Improving registration results using white and gray matter segmentations

Note

The tutorials in this section focus only on the full gray and white matter segmentations. For more granular analysis (i.e. extracting metrics for individual gray and white matter tracts), visit the Atlas-based analysis tutorial.